Significance threshold: 0.1

Statistics

name r_mean n sig sig_pos sig_neg
1 active_enhancer 0.03 1397 48 39 9
2 cgi 0.01 3598 9 5 4
3 exon 0.03 13900 202 177 25
4 gene_body 0.01 4445 12 7 5
5 H3K27ac 0.02 1877 50 36 14
6 H3K27me3 0.03 591 3 3 0
7 H3K4me1 0.03 2317 75 63 12
8 H3K4me1_Tet1 0.04 315 7 7 0
9 IAP -0.02 98 1 1 0
10 intergenic 0.02 6690 28 18 10
11 intron 0.02 23583 77 71 6
12 LMR 0.03 2255 67 51 16
13 p300 0.01 2906 39 26 13
14 prom 0.00 3883 7 2 5
15 prom_cgi 0.01 3325 2 1 1
16 prom_non_cgi -0.02 263 11 2 9
17 Tet2 0.02 328 0 0 0
18 Wu_Tet1 0.03 3660 26 24 2

All sites

name ens_id gene_id r p_adj pluri
1 active_enhancer ENSMUSG00000061887 Ssbp3 0.71 0.00 no
2 active_enhancer ENSMUSG00000004665 Cnn2 0.69 0.00 yes
3 active_enhancer ENSMUSG00000008393 Carhsp1 0.63 0.00 no
4 cgi ENSMUSG00000028184 Lphn2 0.82 0.00 no
5 cgi ENSMUSG00000000365 Rnf17 -0.68 0.00 no
6 cgi ENSMUSG00000029761 Cald1 0.68 0.01 yes
7 exon ENSMUSG00000028184 Lphn2 0.80 0.00 no
8 exon ENSMUSG00000028184 Lphn2 0.80 0.00 no
9 exon ENSMUSG00000023972 Ptk7 0.75 0.00 no
10 gene_body ENSMUSG00000051176 Zfp42 -0.71 0.00 yes
11 gene_body ENSMUSG00000045699 Gm8935 -0.68 0.00 no
12 gene_body ENSMUSG00000009112 Bcl2l13 0.56 0.01 no
13 H3K27ac ENSMUSG00000062300 Pvrl2 0.67 0.00 no
14 H3K27ac ENSMUSG00000061887 Ssbp3 0.66 0.00 no
15 H3K27ac ENSMUSG00000004665 Cnn2 0.63 0.00 yes
16 H3K27ac ENSMUSG00000008393 Carhsp1 0.63 0.00 no
17 H3K27me3 ENSMUSG00000032525 Nktr 0.54 0.06 no
18 H3K27me3 ENSMUSG00000022565 Plec 0.49 0.08 no
19 H3K27me3 ENSMUSG00000020778 2310004N24Rik 0.47 0.08 no
20 H3K4me1 ENSMUSG00000061887 Ssbp3 0.71 0.00 no
21 H3K4me1 ENSMUSG00000056515 Rab31 0.77 0.00 no
22 H3K4me1 ENSMUSG00000004665 Cnn2 0.69 0.00 yes
23 H3K4me1_Tet1 ENSMUSG00000004665 Cnn2 0.69 0.00 yes
24 H3K4me1_Tet1 ENSMUSG00000008393 Carhsp1 0.63 0.00 no
25 H3K4me1_Tet1 ENSMUSG00000052681 Rap1b 0.61 0.00 no
26 IAP ENSMUSG00000006134 Crkl 0.51 0.02 no
27 intergenic ENSMUSG00000060461 Dppa5a -0.68 0.00 no
28 intergenic ENSMUSG00000028583 Pdpn 0.61 0.00 no
29 intergenic ENSMUSG00000056300 Gm13247 -0.60 0.00 no
30 intron ENSMUSG00000021953 Tdh -0.79 0.00 yes
31 intron ENSMUSG00000025868 Higd2a 0.75 0.00 no
32 intron ENSMUSG00000023972 Ptk7 0.71 0.00 no
33 LMR ENSMUSG00000021953 Tdh -0.73 0.00 yes
34 LMR ENSMUSG00000092345 Gm20503 0.73 0.00 no
35 LMR ENSMUSG00000026305 Lrrfip1 0.68 0.00 no
36 p300 ENSMUSG00000060461 Dppa5a -0.83 0.00 no
37 p300 ENSMUSG00000026604 Ptpn14 0.79 0.00 no
38 p300 ENSMUSG00000056515 Rab31 0.74 0.00 no
39 prom ENSMUSG00000060461 Dppa5a -0.78 0.00 no
40 prom ENSMUSG00000045699 Gm8935 -0.70 0.00 no
41 prom ENSMUSG00000051176 Zfp42 -0.58 0.02 yes
42 prom_cgi ENSMUSG00000000365 Rnf17 -0.59 0.06 no
43 prom_cgi ENSMUSG00000024308 Tapbp 0.57 0.06 no
44 prom_non_cgi ENSMUSG00000060461 Dppa5a -0.78 0.00 no
45 prom_non_cgi ENSMUSG00000045699 Gm8935 -0.70 0.00 no
46 prom_non_cgi ENSMUSG00000051176 Zfp42 -0.58 0.00 yes
47 Wu_Tet1 ENSMUSG00000029106 Add1 0.67 0.00 no
48 Wu_Tet1 ENSMUSG00000004665 Cnn2 0.69 0.00 yes
49 Wu_Tet1 ENSMUSG00000029616 Erp29 0.74 0.00 no

Significant sites

Visualization

Exons

gene_id ens_id r p p_adj
1 Lphn2 ENSMUSG00000028184 0.80 0.00 0.00
2 Gps1 ENSMUSG00000025156 0.78 0.00 0.00
3 Ptk7 ENSMUSG00000023972 0.75 0.00 0.00
4 Cnn2 ENSMUSG00000004665 0.73 0.00 0.00
5 Mrps10 ENSMUSG00000034729 0.73 0.00 0.00
6 Rrp8 ENSMUSG00000030888 0.73 0.00 0.00
7 Timm50 ENSMUSG00000003438 0.72 0.00 0.00
8 Tspan3 ENSMUSG00000032324 0.71 0.00 0.00

H3K27ac

gene_id ens_id r p p_adj
1 Pvrl2 ENSMUSG00000062300 0.67 0.00 0.00
2 Tead2 ENSMUSG00000030796 0.66 0.00 0.00
3 Ssbp3 ENSMUSG00000061887 0.66 0.00 0.00
4 Cnn2 ENSMUSG00000004665 0.63 0.00 0.00
5 Fam38a ENSMUSG00000014444 0.63 0.00 0.00
6 Carhsp1 ENSMUSG00000008393 0.63 0.00 0.00
7 Dgcr6 ENSMUSG00000003531 0.61 0.00 0.03
8 Trio ENSMUSG00000022263 0.59 0.00 0.03

H3K4me1

gene_id ens_id r p p_adj
1 Rab31 ENSMUSG00000056515 0.77 0.00 0.00
2 Ssbp3 ENSMUSG00000061887 0.71 0.00 0.00
3 Flnb ENSMUSG00000025278 0.70 0.00 0.00
4 Cnn2 ENSMUSG00000004665 0.69 0.00 0.00
5 Agpat6 ENSMUSG00000031545 0.66 0.00 0.01
6 Slc6a6 ENSMUSG00000030096 0.66 0.00 0.01
7 Ppp2r5c ENSMUSG00000017843 0.66 0.00 0.01
8 Rpn2 ENSMUSG00000027642 0.64 0.00 0.02

LMR

gene_id ens_id r p p_adj
1 Gm20503 ENSMUSG00000092345 0.73 0.00 0.00
2 Tdh ENSMUSG00000021953 -0.73 0.00 0.00
3 Prtg ENSMUSG00000036030 0.69 0.00 0.01
4 Lrrfip1 ENSMUSG00000026305 0.68 0.00 0.00
5 Rnf17 ENSMUSG00000000365 -0.64 0.00 0.01
6 Ssbp3 ENSMUSG00000061887 0.62 0.00 0.02
7 Ptpn14 ENSMUSG00000026604 0.62 0.00 0.02
8 Stx4a ENSMUSG00000030805 -0.61 0.00 0.02

p300

gene_id ens_id r p p_adj
1 Dppa5a ENSMUSG00000060461 -0.83 0.00 0.00
2 Ptpn14 ENSMUSG00000026604 0.79 0.00 0.00
3 Rab31 ENSMUSG00000056515 0.74 0.00 0.00
4 Tdh ENSMUSG00000021953 -0.70 0.00 0.01
5 Rnf17 ENSMUSG00000000365 -0.68 0.00 0.00
6 Chchd10 ENSMUSG00000049422 -0.66 0.00 0.00
7 Stx4a ENSMUSG00000030805 -0.63 0.00 0.01
8 Ppp2r5c ENSMUSG00000017843 0.63 0.00 0.02

Non-CGI promotor

gene_id ens_id r p p_adj
1 Dppa5a ENSMUSG00000060461 -0.78 0.00 0.00
2 Gm8935 ENSMUSG00000045699 -0.70 0.00 0.00
3 Zfp42 ENSMUSG00000051176 -0.58 0.00 0.00
4 Eif4g1 ENSMUSG00000045983 0.55 0.00 0.01
5 Spp1 ENSMUSG00000029304 -0.51 0.00 0.01
6 Tet1 ENSMUSG00000047146 -0.49 0.00 0.04
7 Rbpj ENSMUSG00000039191 -0.47 0.00 0.10
8 Tagln ENSMUSG00000032085 0.47 0.00 0.04

Wu_Tet1

gene_id ens_id r p p_adj
1 Erp29 ENSMUSG00000029616 0.74 0.00 0.00
2 Cnn2 ENSMUSG00000004665 0.69 0.00 0.00
3 Add1 ENSMUSG00000029106 0.67 0.00 0.00
4 Pdlim7 ENSMUSG00000021493 0.65 0.00 0.00
5 Wwc2 ENSMUSG00000031563 0.64 0.00 0.05
6 Rab31 ENSMUSG00000056515 0.63 0.00 0.02
7 Xpo5 ENSMUSG00000067150 0.62 0.00 0.05
8 Cpsf7 ENSMUSG00000034820 0.62 0.00 0.04